A custom rebuild and replatform using AWS

Leading biotechnology company

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The client

Leading biotechnology company

Our client is a market-leading biotechnology company headquartered in the UK that sells to markets globally. They have a proven track record of delivering disruptive technologies to the markets that they serve, and are focused on automation and increasing ease of use through the provision of more cost-effective solutions. Our clients’ technologies are used by research scientists worldwide, as well as to support ‘real-life’ decision making in healthcare, industry and other applied settings.

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Key outcomes

Working alongside our client, we built a new self-service portal for employees to procure bioinformatic compute and storage, resulting in:

  • Optimisation Enhanced self-service AWS procurement with integrated cost visibility
  • Acceleration Efficient very large file data upload, storage and sharing
  • Usability Scalable framework that enhances user experience
The Challenge

A legacy computing platform that needed modernising

Our client used a legacy platform, built using a legacy stack to set up computing resources for conducting bioinformatic experiments, data requests from external customers for troubleshooting, and lab set-up for product training.

Users of the system frequently encountered constraints such as restrictions on sharing large files, and needed a more modern solution.

They required a replatforming of the application onto a more maintainable, scalable platform, using a software stack that could better meet the needs of users.

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THE SOLUTION

Replatforming a self-service Cloud compute and storage portal onto a new stack in AWS

Our long-term experience working with the client, being embedded in their development teams across multiple projects, meant they turned to us for the product build.

Our familiarity with their infrastructure and software development ecosystem meant we were best placed to effectively replatform the service.

After an initial Discovery phase to gather requirements for the new solution, the team, alongside the client, determined that building a bespoke platform was required, given the specific client needs.

A full build and delivery team was then assembled to rebuild the self-service, Cloud-based platform over a number of months.

The team used well-established tools within the client ecosystem, such as Terraform and Gitlab CI/CD, AWS Lambda and AWS ECS-Fargate, and a serverless architecture pattern in AWS, to replatform the service.

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KEY TECHNOLOGIES

We provided a custom rebuild and replatform using:

  • AWS_Logo
  • terraform_logo
  • GitLab_logo.svg
The Results

An enhanced platform with scalable infrastructure and a better user experience

The portal surfaces running costs, allows uploads of large datasets in a private storage area, and enables data to be shared with external partners.

The new self-service portal allows our client’s users to accomplish three things; procure AWS cloud infrastructure on-demand while surfacing running costs; upload and store their large datasets in a private storage area, and share data with their external partners via the browser and command line interface (CLI), in multiple regions.

These collections of instances (known as stacks), can be used for remote training purposes, or for bioinformatic experiments. The portal also allows users to request or share large DNA files over the browser and CLI to other users, which previously wouldn’t have been possible.

This self-service portal was developed to establish the foundation for an ‘app of apps’, a platform that integrates multiple applications into a single interface. It also improves on the prior, legacy app to provide scalability, a better user experience, and cost management.

The portal is the new user interface for internal users within our client to request and deliver on-demand large Cloud computing instances (using AWS), while surfacing running costs to run bioinformatics analysis jobs.

Having worked as a blended team throughout the project, once the infrastructure was deployed and the service operational, we seamlessly handed over the software services and thorough documentation to our client’s development teams, for further enhancements going forward.

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